Classical models in biology (lecture)

  • Teaching

    Details

    Faculty Faculty of Science and Medicine
    Domain Biology
    Code UE-SBL.06002
    Languages English
    Type of lesson Lecture
    Level Master
    Semester SP-2019

    Schedules and rooms

    Contact's hours 28

    Teaching

    Responsibles
    • Bersier Louis-Félix
    Teachers
    • Bersier Louis-Félix
    • Rohr Rudolf Philippe
    Description Le cours commence par une analyse approfondie des modèles classiques en dynamique des populations. Ensuite, le modèle de Bernoulli pour la variole est abordé mathématiquement; il est complété par les modèles épidémiologiques simples. La mathématique des modèles du chémostat, des populations avec structure d'âge et de Luria-Delbrück est expliquée. Le cours finit par l'analyse de divers modèles décrivant les interactions entre espèces. Le cours introduit les concepts d'équations différentielles et aux différences finies, d'équilibre, de stabilité, d'espace de phase, de stabilité locale, de valeurs et vecteurs propres, et de modèles déterministes et stochastiques.

    The course starts with an in-depth analysis of classical models of population dynamics. It continues with the mathematical treatment of Bernoulli model of smallpox disease, and extends to epidemiological models. The mathematics of chemostat, age-structured, and Luria-Delbrück models are explained. The course ends with study of various models for systems of interacting species. The course introduces the concepts of differential and finite difference equations, equilibrium, stability, phase space, local stability analysis, eigenvalues and eigenvectors, and deterministic and stochastic models.
    Training objectives Les étudiants seront capables de comprendre d'une manière critique les modèles classiques en biologie. Ils sauront lire et analyser les équations et évaluer leurs hypothèses de base, leurs porté et limitations. Ils auront acquis les connaissances nécessaires pour élaborer des modèles simples et pour communiquer avec les mathématiciens lors du développement de modèles plus complexes.

    Students will be able to critacally understand classical models in biology. They will be able to read and analyze equations, and to evaluate their assumptions, scope and limitations. They will acquire the necessary skills to elaborate simple models and to communicate and interact with mathematicians in the development of more complex models.
    Comments Remplace MA.6002
    Softskills No
    Off field No
    BeNeFri Yes
    Mobility Yes
    UniPop No
  • Assessments methods

    Written exam - SP-2019, Session d'été 2019

    Assessments methods By rating
    Descriptions of Exams Written (45 min.) or oral (20 min.) exam

    Written exam - SP-2019, Autumn Session 2019

    Assessments methods By rating
    Descriptions of Exams Written (45 min.) or oral (20 min.) exam
  • Assignment
    Valid for the following curricula:
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    Paquet indépendant des branches > Specialized courses in Biology (Master level)

    Additional programme requirements for PhD studies [PRE-DOC]
    Version: 2020_1/v_01
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    Advanced biomedical Sciences 30
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    Advanced Biomedical Sciences (BMS-A), minor 30 (from AS2020 on) > Advanced Biomedical Sciences, minor 30, compulsory courses (from AS2018 on)

    Biology [3e cycle]
    Version: 2015_1/V_01
    Continuing education > Specialized courses in Biology (Master level)

    Biology [POST-DOC]
    Version: 2015_1/V_01
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